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Comparison Filters

All Samples, Comparisons, and Projects within OmicSoft Land's are associated with extensive metadata, which can be used to filter Land data to find the samples users are interested in. This page describes some filters that can be used to pare down to comparisons of interest. The most common comparison filters are shown here:

ComparisonFilters

Users can add additional filters from the comparison metadata using the Add Filter button:

AddComparisonFilters

Fold Change Cutoff

Users can filter to comparisons in which a gene is differentially regulated by typing in fold changes, or using predefined filters:

foldchange

PValue Cutoff

Find where a gene's differentially expression is below a certain p value threshold

pval_cutoff

ComparisonCategory

Define the type of contrast that was performed (e.g. Disease vs. Normal or Treatment vs. Control)

ComparisonCategory

Case.DiseaseCategory

Find comparisons where the test subject had a specified disease:

filter_case_diseasecategory_png

Case.Treatment

Find comparisons when the subject had a specified treatment:

filter_case_treatment_png